Genomic and transcriptomic perspectives on mycoremediation of polycyclic aromatic hydrocarbons
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Park, Hongjae | - |
dc.contributor.author | Choi, In-Geol | - |
dc.date.accessioned | 2021-12-09T11:41:40Z | - |
dc.date.available | 2021-12-09T11:41:40Z | - |
dc.date.created | 2021-08-30 | - |
dc.date.issued | 2020-08 | - |
dc.identifier.issn | 0175-7598 | - |
dc.identifier.uri | https://scholar.korea.ac.kr/handle/2021.sw.korea/130557 | - |
dc.description.abstract | Mycoremediation holds great potential in remedying toxic environments contaminated with polyaromatic organic pollutants. To harness the natural process for practical applications, understanding the genetic and molecular basis of the remediation process is prerequisite. Compared to known bacterial degradation pathways of aromatic pollutants, however, the fungal degradation system is less studied and understanding of the genetic basis for biochemical activity is still incomplete. In this review, we surveyed recent findings from genomic and transcriptomic approaches to mycoremediation of aromatic pollutants, in company with the genomic basis of polycyclic aromatic hydrocarbon (PAH) degradation by basidiomycete fungi,Dentipellissp. KUC8613. Unique features in the fungal degradation of PAHs were outlined by multiple cellular processes: (i) the initial oxidation of recalcitrant contaminants by various oxidoreductases including mono- and dioxygenases, (ii) the following detoxification, and (iii) the mineralization of activated pollutants that are common metabolism in many fungi. Along with the genomic data, the transcriptomic analysis not only posits a full repertoire of inducible genes that are common or specific to metabolize different PAHs but also leads to the discovery of uncharacterized genes with potential functions for bioremediation processes. In addition, the metagenomic study accesses community level of mycoremediation process to seek for the potential species or a microbial consortium in the natural environments. The comprehensive understanding of fungal degradation in multiple levels will accelerate practical application of mycoremediation. | - |
dc.language | English | - |
dc.language.iso | en | - |
dc.publisher | SPRINGER | - |
dc.subject | WHITE-ROT FUNGI | - |
dc.subject | PAH DEGRADATION | - |
dc.subject | AZO-DYE | - |
dc.subject | BIOREMEDIATION | - |
dc.subject | POLLUTANTS | - |
dc.subject | ENZYMES | - |
dc.subject | LIGNIN | - |
dc.subject | BIODEGRADATION | - |
dc.subject | PHENANTHRENE | - |
dc.subject | SOIL | - |
dc.title | Genomic and transcriptomic perspectives on mycoremediation of polycyclic aromatic hydrocarbons | - |
dc.type | Article | - |
dc.contributor.affiliatedAuthor | Choi, In-Geol | - |
dc.identifier.doi | 10.1007/s00253-020-10746-1 | - |
dc.identifier.scopusid | 2-s2.0-85086773333 | - |
dc.identifier.wosid | 000542080100002 | - |
dc.identifier.bibliographicCitation | APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, v.104, no.16, pp.6919 - 6928 | - |
dc.relation.isPartOf | APPLIED MICROBIOLOGY AND BIOTECHNOLOGY | - |
dc.citation.title | APPLIED MICROBIOLOGY AND BIOTECHNOLOGY | - |
dc.citation.volume | 104 | - |
dc.citation.number | 16 | - |
dc.citation.startPage | 6919 | - |
dc.citation.endPage | 6928 | - |
dc.type.rims | ART | - |
dc.type.docType | Review | - |
dc.description.journalClass | 1 | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Biotechnology & Applied Microbiology | - |
dc.relation.journalWebOfScienceCategory | Biotechnology & Applied Microbiology | - |
dc.subject.keywordPlus | WHITE-ROT FUNGI | - |
dc.subject.keywordPlus | PAH DEGRADATION | - |
dc.subject.keywordPlus | AZO-DYE | - |
dc.subject.keywordPlus | BIOREMEDIATION | - |
dc.subject.keywordPlus | POLLUTANTS | - |
dc.subject.keywordPlus | ENZYMES | - |
dc.subject.keywordPlus | LIGNIN | - |
dc.subject.keywordPlus | BIODEGRADATION | - |
dc.subject.keywordPlus | PHENANTHRENE | - |
dc.subject.keywordPlus | SOIL | - |
dc.subject.keywordAuthor | Polycyclic aromatic hydrocarbons | - |
dc.subject.keywordAuthor | Mycoremediation | - |
dc.subject.keywordAuthor | Dentipellissp | - |
dc.subject.keywordAuthor | KUC8613 | - |
dc.subject.keywordAuthor | Transcriptomics | - |
dc.subject.keywordAuthor | Metagenomics | - |
Items in ScholarWorks are protected by copyright, with all rights reserved, unless otherwise indicated.
(02841) 서울특별시 성북구 안암로 14502-3290-1114
COPYRIGHT © 2021 Korea University. All Rights Reserved.
Certain data included herein are derived from the © Web of Science of Clarivate Analytics. All rights reserved.
You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.