Zoogloea dura sp. nov., a N-2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera
DC Field | Value | Language |
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dc.contributor.author | Dahal, Ram Hari | - |
dc.contributor.author | Chaudhary, Dhiraj Kumar | - |
dc.contributor.author | Kim, Dong-Uk | - |
dc.contributor.author | Kim, Jaisoo | - |
dc.date.accessioned | 2021-08-31T16:11:31Z | - |
dc.date.available | 2021-08-31T16:11:31Z | - |
dc.date.created | 2021-06-18 | - |
dc.date.issued | 2020 | - |
dc.identifier.issn | 1466-5026 | - |
dc.identifier.uri | https://scholar.korea.ac.kr/handle/2021.sw.korea/59040 | - |
dc.description.abstract | A motile, Gram-stain-negative, rod-shaped bacterium, designated G-4-1-14(T), was obtained from forest soil sampled at Gwanggyo mountain, Gyeonggi-do, Republic of Korea. Cells were colourless, aerobic, grew optimally at 28-35 degrees C and hydrolysed DNA and casein. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain G-4-1-14(T) formed a lineage within the genus Zoogloea. The closest members were Zoogloea resiniphila ATCC 70068(T) (98.6% sequence similarity), Zoogloea caeni EMB43(T) (98.2 %), Zoogloea oryzae A-7(T) (97.7%), Zoogloea ramigera IAM 12136(T) (96.9 %) and Zoogloea oleivorans BucT (96.2%). The major respiratory quinone was ubiquinone-8 and the principal polar lipids were phosphatidylethanolamine, phosphatidyl-N-methylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The predominant cellular fatty acids were summed feature 3 (iso-C-15:0 2-OH/C-16:1 omega 7c) and C-16:0. The DNA G+C content was 65.9 mol%. The average nucleotide identity and digital DNA-DNA hybridization relatedness values between strain G-4-1-14(T) and other type strains were <= 81.6 and <= 24.9%, respectively, which are below the species demarcation thresholds. Based on the results of phenotypic, phylogenetic and genomic analyses, strain G-4-1-14(T) represents a novel species in the genus Zoogloea, for which the name Zoogloea dura sp. nov. is proposed. The type strain is G-4-1-14(T) (=KACC 21618(T)=NBRC 114358(T)). In addition, we propose emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera. | - |
dc.language | English | - |
dc.language.iso | en | - |
dc.publisher | MICROBIOLOGY SOC | - |
dc.subject | ALGORITHM | - |
dc.subject | RECLASSIFICATION | - |
dc.subject | HYBRIDIZATION | - |
dc.title | Zoogloea dura sp. nov., a N-2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera | - |
dc.type | Article | - |
dc.contributor.affiliatedAuthor | Chaudhary, Dhiraj Kumar | - |
dc.identifier.doi | 10.1099/ijsem.0.004416 | - |
dc.identifier.scopusid | 2-s2.0-85094684145 | - |
dc.identifier.wosid | 000582680200016 | - |
dc.identifier.bibliographicCitation | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.70, no.10, pp.5312 - 5318 | - |
dc.relation.isPartOf | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.title | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.volume | 70 | - |
dc.citation.number | 10 | - |
dc.citation.startPage | 5312 | - |
dc.citation.endPage | 5318 | - |
dc.type.rims | ART | - |
dc.type.docType | Article | - |
dc.description.journalClass | 1 | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.subject.keywordPlus | ALGORITHM | - |
dc.subject.keywordPlus | RECLASSIFICATION | - |
dc.subject.keywordPlus | HYBRIDIZATION | - |
dc.subject.keywordAuthor | Forest soil | - |
dc.subject.keywordAuthor | N2 fixation | - |
dc.subject.keywordAuthor | Novel species | - |
dc.subject.keywordAuthor | Proteobacteria | - |
dc.subject.keywordAuthor | Zoogloea dura | - |
dc.subject.keywordAuthor | Zoogloeaceae | - |
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