Serinicoccus sediminis sp. nov., isolated from tidal flat sediment
DC Field | Value | Language |
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dc.contributor.author | Lee, Dong Wan | - |
dc.contributor.author | Yoo, Yeonjae | - |
dc.contributor.author | Lee, Hanbyul | - |
dc.contributor.author | Kwon, Bong-Oh | - |
dc.contributor.author | Khim, Jong Seong | - |
dc.contributor.author | Yim, Un Hyuk | - |
dc.contributor.author | Kim, Beom Seok | - |
dc.contributor.author | Kim, Gyu-Hyeok | - |
dc.contributor.author | Kim, Jae-Jin | - |
dc.date.accessioned | 2021-09-01T13:23:21Z | - |
dc.date.available | 2021-09-01T13:23:21Z | - |
dc.date.created | 2021-06-19 | - |
dc.date.issued | 2019-07 | - |
dc.identifier.issn | 1466-5026 | - |
dc.identifier.uri | https://scholar.korea.ac.kr/handle/2021.sw.korea/64603 | - |
dc.description.abstract | A novel Gram-strain-positive, non-spore-forming bacterial strain, designated GP-T3-3(T), was isolated from sediment sampled at a tidal flat in Gopado, Republic of Korea. Cells were aerobic, catalase-negative, oxidase-positive, non-motile cocci that occurred singly, in pairs or in clusters. Strain GP-T3-3(T) grew at 4-45 degrees C (optimum, 28-37 degrees C), at pH 4.0-12.0 (pH 8.0-9.0) and in the presence of 0-15 % (w/v) NaCl (3-5 %). Colonies of strain GP-T3-3(T) were deep-yellow, circular, smooth and pulvinate. The results of the phylogenetic analyses based on 16S rRNA gene sequences indicated that strain GP-T3-3(T) was closely related to Serinicoccus profundi MCCC 1A05965(T) (99.1 %), Serinicoccus chungangensis CAU 9536(T) (99.0 %) and Serinicoccus marinus JC1078(T) (98.0 %). The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The predominant respiratory quinone was MK-8(H-4) and the major fatty acids were anteiso-C-17:0, iso-C-16:0, iso-C(15:0 )and anteiso C-15:0. The polar lipid profile consisted of diphosphadidylglycerol, phosphadidylglycerol, phosphatidylcholine, phosphatidylinositol and two unidentified phospholipids. The DNA G+C content was 72.9 mol%. DNA-DNA relatedness values between strain GP-T3-3(T) and type strains of the genus Serinicoccus ranged from 28.9 to 50.5 %. On the basis of the phenotypic differences and DNA-DNA relatedness data, the isolate represents a new species of the genus Serinicoccus, for which the name Serinicoccus sediminis sp. nov. is proposed. The type strain is GP-T3-3(T) (=KCTC 49173 (T) =JCM 32825(T) =KCCM 43309(T) =KACC 19850(T)). | - |
dc.language | English | - |
dc.language.iso | en | - |
dc.publisher | MICROBIOLOGY SOC | - |
dc.subject | DEOXYRIBONUCLEIC-ACID | - |
dc.subject | EMENDED DESCRIPTION | - |
dc.subject | ACTINOMYCETE | - |
dc.subject | SEQUENCES | - |
dc.subject | DNA | - |
dc.title | Serinicoccus sediminis sp. nov., isolated from tidal flat sediment | - |
dc.type | Article | - |
dc.contributor.affiliatedAuthor | Lee, Hanbyul | - |
dc.contributor.affiliatedAuthor | Kim, Beom Seok | - |
dc.contributor.affiliatedAuthor | Kim, Gyu-Hyeok | - |
dc.contributor.affiliatedAuthor | Kim, Jae-Jin | - |
dc.identifier.doi | 10.1099/ijsem.0.003415 | - |
dc.identifier.scopusid | 2-s2.0-85069234599 | - |
dc.identifier.wosid | 000473325500024 | - |
dc.identifier.bibliographicCitation | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.69, no.7, pp.1998 - 2003 | - |
dc.relation.isPartOf | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.title | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.volume | 69 | - |
dc.citation.number | 7 | - |
dc.citation.startPage | 1998 | - |
dc.citation.endPage | 2003 | - |
dc.type.rims | ART | - |
dc.type.docType | Article | - |
dc.description.journalClass | 1 | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.subject.keywordPlus | DEOXYRIBONUCLEIC-ACID | - |
dc.subject.keywordPlus | EMENDED DESCRIPTION | - |
dc.subject.keywordPlus | ACTINOMYCETE | - |
dc.subject.keywordPlus | SEQUENCES | - |
dc.subject.keywordPlus | DNA | - |
dc.subject.keywordAuthor | Actinobacteria | - |
dc.subject.keywordAuthor | meso-diaminopimelic acid | - |
dc.subject.keywordAuthor | polyphasic approach | - |
dc.subject.keywordAuthor | tidal flat | - |
dc.subject.keywordAuthor | Serinicoccus | - |
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