Blastococcus litoris sp nov., isolated from sea-tidal flat sediment
DC Field | Value | Language |
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dc.contributor.author | Lee, Dong Wan | - |
dc.contributor.author | Lee, Hanbyul | - |
dc.contributor.author | Kwon, Bong-Oh | - |
dc.contributor.author | Khim, Jong Seong | - |
dc.contributor.author | Yim, Un Hyuk | - |
dc.contributor.author | Kim, Beom Seok | - |
dc.contributor.author | Kim, Jae-Jin | - |
dc.date.accessioned | 2021-09-02T04:22:56Z | - |
dc.date.available | 2021-09-02T04:22:56Z | - |
dc.date.created | 2021-06-19 | - |
dc.date.issued | 2018-11 | - |
dc.identifier.issn | 1466-5026 | - |
dc.identifier.uri | https://scholar.korea.ac.kr/handle/2021.sw.korea/72050 | - |
dc.description.abstract | A novel Gram-strain-positive, non-spore-forming bacterial strain, designated GP-S2-8(T), was isolated from a sea-tidal flat sediment sample from Gopado, Republic of Korea. Cells were aerobic, catalase-negative, oxidase-positive, non-motile and cocci, occurring singly, in pairs or in tetrads, and often tending to form aggregates. The strain grew at 4-45 degrees C (optimum, 28-37 degrees C), at pH 4.0-11.0 (pH 7.0-9.0) and in the presence of 0-11% (w/v) NaCl (0-3 %). Phylogenetic analyses based on 16S rRNA gene sequences represented that the isolate belongs to the genus Blastococcus. The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. Whole-cell sugar analysis of strain GP-S2-8(T) revealed rhamnose, glucose and mannose as characteristic sugars. The predominant respiratory quinone was MK-9(H-4) and the major fatty acids were iso-C-16:0, iso-C-16:1 H, summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c), iso-C-15:0 and iso-C-14:0. The polar lipid profile included diphosphadidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol, one unidentified glycophospholipid, two unidentified phospholipids and five unidentified lipids. The DNA G+C content was 74.2 mol%. DNA-DNA relatedness values between strain GP-S2-8(T) and type strains of the genus Blastococcus ranged from 14.6 to 48.6 %. On the basis of the phenotypic differences and DNA-DNA relatedness data, the isolate represents a new species of the genus Blastococcus, for which the name Blastococcus litoris sp. nov. is proposed. The type strain is GP-S2-8(T) (=KCCM 43275(T)=JCM 32354(T)=DSM 106127(T)=KCTC 49078(T)). | - |
dc.language | English | - |
dc.language.iso | en | - |
dc.publisher | MICROBIOLOGY SOC | - |
dc.subject | GENUS BLASTOCOCCUS | - |
dc.subject | DEOXYRIBONUCLEIC-ACID | - |
dc.subject | BACTERIAL SYSTEMATICS | - |
dc.subject | EMENDED DESCRIPTION | - |
dc.subject | MOLL 1970 | - |
dc.subject | IDENTIFICATION | - |
dc.subject | CHROMATOGRAPHY | - |
dc.subject | HYBRIDIZATION | - |
dc.subject | ENDOPHYTICUS | - |
dc.subject | SAXOBSIDENS | - |
dc.title | Blastococcus litoris sp nov., isolated from sea-tidal flat sediment | - |
dc.type | Article | - |
dc.contributor.affiliatedAuthor | Lee, Hanbyul | - |
dc.contributor.affiliatedAuthor | Kim, Beom Seok | - |
dc.contributor.affiliatedAuthor | Kim, Jae-Jin | - |
dc.identifier.doi | 10.1099/ijsem.0.003004 | - |
dc.identifier.scopusid | 2-s2.0-85055840162 | - |
dc.identifier.wosid | 000448920600007 | - |
dc.identifier.bibliographicCitation | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.68, no.11, pp.3435 - 3440 | - |
dc.relation.isPartOf | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.title | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.volume | 68 | - |
dc.citation.number | 11 | - |
dc.citation.startPage | 3435 | - |
dc.citation.endPage | 3440 | - |
dc.type.rims | ART | - |
dc.type.docType | Article | - |
dc.description.journalClass | 1 | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.subject.keywordPlus | GENUS BLASTOCOCCUS | - |
dc.subject.keywordPlus | DEOXYRIBONUCLEIC-ACID | - |
dc.subject.keywordPlus | BACTERIAL SYSTEMATICS | - |
dc.subject.keywordPlus | EMENDED DESCRIPTION | - |
dc.subject.keywordPlus | MOLL 1970 | - |
dc.subject.keywordPlus | IDENTIFICATION | - |
dc.subject.keywordPlus | CHROMATOGRAPHY | - |
dc.subject.keywordPlus | HYBRIDIZATION | - |
dc.subject.keywordPlus | ENDOPHYTICUS | - |
dc.subject.keywordPlus | SAXOBSIDENS | - |
dc.subject.keywordAuthor | Actinobacteria | - |
dc.subject.keywordAuthor | beach sediment | - |
dc.subject.keywordAuthor | sea-tidal flat | - |
dc.subject.keywordAuthor | Blastococcus | - |
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