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Crystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae

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dc.contributor.authorLee, Ji-Young-
dc.contributor.authorPark, Si Hoon-
dc.contributor.authorJeong, Byung-Cheon-
dc.contributor.authorSong, Hyun Kyu-
dc.date.accessioned2021-09-05T05:46:49Z-
dc.date.available2021-09-05T05:46:49Z-
dc.date.created2021-06-15-
dc.date.issued2014-09-
dc.identifier.issn2053-230X-
dc.identifier.urihttps://scholar.korea.ac.kr/handle/2021.sw.korea/97561-
dc.description.abstractSki7 (superkiller protein 7) plays a critical role in the mRNA surveillance pathway. The C-terminal fragment of Ski7 (residues 520-747) from Saccharomyces cerevisiae was heterologously expressed in Escherichia coli and purified to homogeneity. It was successfully crystallized and preliminary X-ray data were collected to 2.0 angstrom resolution using synchrotron radiation. The crystal belonged to a trigonal space group, either P3(1)21 or P3(2)21, with unit-cell parameters a = b = 73.5, c = 83.6 angstrom. The asymmetric unit contains one molecule of the C-terminal fragment of Ski7 with a corresponding crystal volume per protein mass (V-M) of 2.61 angstrom(3) Da(-1) and a solvent content of 52.8% by volume. The merging R factor is 6.6%. Structure determination by MAD phasing is under way.-
dc.languageEnglish-
dc.language.isoen-
dc.publisherINT UNION CRYSTALLOGRAPHY-
dc.subjectMESSENGER-RNA DECAY-
dc.subjectNO-GO-
dc.subjectTRANSLATION TERMINATION-
dc.subjectQUALITY-CONTROL-
dc.subjectFACTORS ERF1-
dc.subjectCOMPLEX-
dc.subjectYEAST-
dc.subjectDOMAIN-
dc.subjectELONGATION-
dc.subjectEXOSOME-
dc.titleCrystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae-
dc.typeArticle-
dc.contributor.affiliatedAuthorSong, Hyun Kyu-
dc.identifier.doi10.1107/S2053230X14016872-
dc.identifier.scopusid2-s2.0-84907022378-
dc.identifier.wosid000341818600026-
dc.identifier.bibliographicCitationACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v.70, pp.1252 - 1255-
dc.relation.isPartOfACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS-
dc.citation.titleACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS-
dc.citation.volume70-
dc.citation.startPage1252-
dc.citation.endPage1255-
dc.type.rimsART-
dc.type.docTypeArticle-
dc.description.journalClass1-
dc.description.journalRegisteredClassscopus-
dc.relation.journalResearchAreaBiochemistry & Molecular Biology-
dc.relation.journalResearchAreaBiophysics-
dc.relation.journalResearchAreaCrystallography-
dc.relation.journalWebOfScienceCategoryBiochemical Research Methods-
dc.relation.journalWebOfScienceCategoryBiochemistry & Molecular Biology-
dc.relation.journalWebOfScienceCategoryBiophysics-
dc.relation.journalWebOfScienceCategoryCrystallography-
dc.subject.keywordPlusMESSENGER-RNA DECAY-
dc.subject.keywordPlusNO-GO-
dc.subject.keywordPlusTRANSLATION TERMINATION-
dc.subject.keywordPlusQUALITY-CONTROL-
dc.subject.keywordPlusFACTORS ERF1-
dc.subject.keywordPlusCOMPLEX-
dc.subject.keywordPlusYEAST-
dc.subject.keywordPlusDOMAIN-
dc.subject.keywordPlusELONGATION-
dc.subject.keywordPlusEXOSOME-
dc.subject.keywordAuthormRNA surveillance-
dc.subject.keywordAuthornonstop decay-
dc.subject.keywordAuthorRNA degradation-
dc.subject.keywordAuthorSaccharomyces cerevisiae-
dc.subject.keywordAuthorSki7-
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