Predicting mechanical properties of silk from its amino acid sequences via machine learning

  • Kim, Yoonjung
  • Yoon, Taeyoung
  • Park, Woo B.
  • Na, Sungsoo
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초록

The silk fiber is increasingly being sought for its superior mechanical properties, biocompatibility, and ecofriendliness, making it promising as a base material for various applications. One of the characteristics of protein fibers, such as silk, is that their mechanical properties are significantly dependent on the amino acid sequence. Numerous studies have been conducted to determine the specific relationship between the amino acid sequence of silk and its mechanical properties. Still, the relationship between the amino acid sequence of silk and its mechanical properties is yet to be clarified. Other fields have adopted machine learning (ML) to establish a relationship between the inputs, such as the ratio of different input material compositions and the resulting mechanical properties. We have proposed a method to convert the amino acid sequence into numerical values for input and succeeded in predicting the mechanical properties of silk from its amino acid sequences. Our study sheds light on predicting mechanical properties of silk fiber from respective amino acid sequences.

키워드

Silk fiberMachine learningMechanical characterizationSequence analysisSPIDER SILKPROTEINSVMEWALD
제목
Predicting mechanical properties of silk from its amino acid sequences via machine learning
저자
Kim, YoonjungYoon, TaeyoungPark, Woo B.Na, Sungsoo
DOI
10.1016/j.jmbbm.2023.105739
발행일
2023-04-01
유형
Article
저널명
Journal of the Mechanical Behavior of Biomedical Materials
140