Characterization of a novel debranching enzyme from Nostoc punctiforme possessing a high specificity for long branched chains

  • Choi, Ji-Hye; 
  • Lee, Heeseob; 
  • Kim, Young-Wan; 
  • Park, Jong-Tae; 
  • Woo, Eui-Jeon; 
  • 외 3명
Citations

WEB OF SCIENCE

7
Citations

SCOPUS

10

초록

A novel debranching enzyme from Nostoc punctiforme PCC73102 (NPDE) exhibits hydrolysis activity toward both alpha-(1,6)- and alpha-(1,4)-glucosidic linkages. The action patterns of NPDE revealed that branched chains are released first, and the resulting maltooligosaccharides are then hydrolyzed. Analysis of the reaction with maltooligosaccharide substrates labeled with C-14-glucose at the reducing end shows that NPDE specifically liberates glucose from the reducing end. Kinetic analyses showed that the hydrolytic activity of NPDE is greatly affected by the length of the substrate. The catalytic efficiency of NPDE increased considerably upon using substrates that can occupy at least eight glycone subsites such as maltononaose and maltooctaosyl-alpha-(1,6)-beta-cyclodextrin. These results imply that NPDE has a unique subsite structure consisting of -8 to +1 subsites. Given its unique subsite structure, side chains shorter than maltooctaose in amylopectin were resistant to hydrolysis by NPDE, and the population of longer side chains was reduced. (C) Elsevier Inc. All rights reserved.

키워드

Nostoc punctiforme; Debranching enzyme; Branched cyclodextrin; Subsite structure; Substrate specificity; NUCLEOTIDE-SEQUENCE; MOLECULAR-STRUCTURE; APU GENE; AMYLOPULLULANASE; STARCH; 4-ALPHA-GLUCANOTRANSFERASE; CYANOBACTERIUM; PULLULANASE; MUTAGENESIS; ISOAMYLASE
제목
Characterization of a novel debranching enzyme from Nostoc punctiforme possessing a high specificity for long branched chains
저자
Choi, Ji-Hye; Lee, Heeseob; Kim, Young-Wan; Park, Jong-Tae; Woo, Eui-Jeon; Kim, Myo-Jeong; Lee, Byong-Hoon; Park, Kwan-Hwa
DOI
10.1016/j.bbrc.2008.11.020
발행일
2009-01-09
유형
Article
저널명
Biochemical and Biophysical Research Communications
권
378
호
2
페이지
224 ~ 229