Machine Learning-Based Prognostic Gene Signature for Early Triple-Negative Breast Cancer

  • Kim, Ju Won; 
  • Lee, Jonghyun; 
  • Lee, Sung Hak; 
  • Ahn, Sangjeong; 
  • Park, Kyong Hwa
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초록

Purpose This study aimed to develop a machine learning-based approach to identify prognostic gene signatures for early-stage triple-negative breast cancer (TNBC) using next-generation sequencing data from Asian populations. Materials and Methods We utilized next-generation sequencing data to analyze gene expression profiles and identify potential biomarkers. Our methodology involved integrating various machine learning techniques, includingfeature selection and model optimization. We employed logistic regression, Kaplan-Meier survival analysis, and receiver operating characteristic (ROC) curves to validate the identified gene signatures. Results We identified a gene signature significantly associated with relapse in TNBC patients. The predictive model demonstrated robustness and accuracy, with an area under the ROC curve of 0.9087, sensitivity of 0.8750, and specificity of 0.9231. The Kaplan-Meier survival analysis revealed a strong association between the gene signature and patient relapse, further validated by logistic regression analysis. Conclusion This study presents a novel machine learning-based prognostic tool for TNBC, offering significant implications for early detection and personalized treatment. The identified gene signature provides a promising approach for improvingthe management of TNBC, contributingto the advancement of precision oncology.

키워드

Triple-negative breast cancer; Prognosis; Precision medicine; Machine learning; SUBTYPES; GATA1
제목
Machine Learning-Based Prognostic Gene Signature for Early Triple-Negative Breast Cancer
저자
Kim, Ju Won; Lee, Jonghyun; Lee, Sung Hak; Ahn, Sangjeong; Park, Kyong Hwa
DOI
10.4143/crt.2024.937
발행일
2025-01
유형
Article
저널명
Cancer Research and Treatment
권
57
호
3
페이지
731 ~ 740