Proximity Labeling Techniques: A Multi-Omics Toolbox

  • Shkel, Olha; 
  • Kharkivska, Yevheniia; 
  • Kim, Yun Kyung; 
  • Lee, Jun-Seok
Citations

WEB OF SCIENCE

20
Citations

SCOPUS

22

초록

Proximity labeling techniques are emerging high-throughput methods for studying protein-protein, protein-RNA, and protein-DNA interactions with temporal and spatial precision. Proximity labeling methods take advantage of enzymes that can covalently label biomolecules with reactive substrates. These labeled biomolecules can be identified using mass spectrometry or next-generation sequencing. The main advantage of these methods is their ability to capture weak or transient interactions between biomolecules. Proximity labeling is indispensable for studying organelle interactomes. Additionally, it can be used to resolve spatial composition of macromolecular complexes. Many of these methods have only recently been introduced; nonetheless, they have already provided new and deep insights into the biological processes at the cellular, organ, and organism levels. In this paper, we review a broad range of proximity labeling techniques, their development, drawbacks and advantages, and implementations in recent studies.

키워드

biotin ligase; DamID; DNA-protein interactions; mass spectrometry; peroxidase; photosensitizer; protein- protein interactions; proximity labeling; PUP-IT; RNA-protein interactions; TRIBE; IN-VIVO; PROTEOMICS APPROACH; BIOTIN LIGASE; CELL-TYPE; REVEALS; BIOTINYLATION; CHROMATIN; PROTEINS; BINDING; ENZYME
제목
Proximity Labeling Techniques: A Multi-Omics Toolbox
저자
Shkel, Olha; Kharkivska, Yevheniia; Kim, Yun Kyung; Lee, Jun-Seok
DOI
10.1002/asia.202101240
발행일
2022-01-17
유형
Review
저널명
Chemistry - An Asian Journal
권
17
호
2