An eRNA transcription checkpoint for diverse signal-dependent enhancer activation programs

  • Wang, Lishuan; 
  • Yuan, Wei; 
  • Gamliel, Amir; 
  • Ma, Wubin; 
  • Lee, Seowon; 
  • ... Oh, Soohwan; 
  • 외 6명
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4
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초록

The evidence that signal- and ligand-dependent pathways function by activating regulatory enhancer programs suggests that a 'checkpoint' strategy may underline activation of many diversely regulated enhancers. Here we report a molecular mechanism common to several acute signal- and ligand-dependent enhancer activation programs based on release of a shared enhancer RNA (eRNA) transcription checkpoint. It requires recruitment of a DNA-dependent protein kinase catalytic subunit (DNA-PKcs)-phosphorylated RING finger repressor (Kr & uuml;ppel-associated box)-associated protein 1 (KAP1) as a modulator, inhibiting its association with 7SK and E3 small ubiquitin-like modifier (SUMO) ligase activity on the CDK9 subunit of positive transcription elongation factor b (P-TEFb). This facilitates formation of an activated P-TEFb complex, licensing eRNA elongation. Overcoming this checkpoint for signal-dependent enhancer activation occurs in diverse pathways, including estrogen receptor-alpha, NF-kappa B-regulated proinflammatory stimulation, androgen receptor and neuronal depolarization. Therefore, a specific strategy required to convert a basal state enhancer P-TEFb complex to an active state to release a conserved checkpoint is apparently employed by several functionally important signal-regulated regulatory enhancers to implement the instructions of the endocrine and paracrine system.

키워드

Androstanolone; Apoptotic Protease Activating Factor 1; Baculoviral Iap Repeat Containing Protein 2; Baculoviral Iap Repeat Containing Protein 3; Cyclic Amp Responsive Element Binding Protein; Protein Kinase; Retinoic Acid; Transcription Factor Gata 3; Transcription Intermediary Factor 1 Beta; Cyclin-dependent Kinase 9; Positive Transcriptional Elongation Factor B; Androgen Receptor; Androstanolone; Apoptotic Protease Activating Factor 1; Cyclic Amp Responsive Element Binding Protein; Cyclin Dependent Kinase 9; Cyclin T1; E1a Associated P300 Protein; Enhancer Rna; Estrogen Receptor Alpha; Histone H3; Homeobox Protein Hox-a10; Immunoglobulin Enhancer Binding Protein; Positive Transcription Elongation Factor B; Protein Kinase; Retinoic Acid; Rna Polymerase Ii; Small Nuclear Rna; Spacer Dna; Sumo Protein; Transcription Factor Gata 3; Transcription Intermediary Factor 1 Beta; Article; Depolarization; Endocrine System; Enhancer Region; Enzyme Activity; Enzyme Phosphorylation; Estrogen Signaling; Hek293t Cell Line; Human; Human Cell; Immunofluorescence; Immunoprecipitation; Mcf-7 Cell Line; Real Time Polymerase Chain Reaction; Reverse Transcription; Rna Synthesis; Rna Transcription; Western Blotting; Animal; Genetic Transcription; Genetics; Metabolism; Signal Transduction; Transcription Initiation; Animals; Cyclin-dependent Kinase 9; Enhancer Elements, Genetic; Humans; Positive Transcriptional Elongation Factor B; Signal Transduction; Transcription, Genetic; Transcriptional Activation; ELONGATION; GENE; ORGANIZATION; RECRUITMENT; REPRESSION; EXPRESSION; COMPLEX; ROLES; BETA; SV40
제목
An eRNA transcription checkpoint for diverse signal-dependent enhancer activation programs
저자
Wang, Lishuan; Yuan, Wei; Gamliel, Amir; Ma, Wubin; Lee, Seowon; Tan, Yuliang; Chen, Zeyu; Taylor, Havilah; Ohgi, Kenneth; Oh, Soohwan; Aggarwal, Aneel K.; Rosenfeld, Michael G.
DOI
10.1038/s41588-025-02138-w
발행일
2025-04
유형
Article
저널명
Nature Genetics
권
57
호
4
페이지
962 ~ 972