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The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae)
- Authors
- Choi, Eunkyung; Im, Tae-Eul; Lee, Seung Jae; Jo, Euna; Kim, Jinmu; Kim, Sun Hee; Chi, Young Min; Kim, Jeong-Hoon; Park, Hyun
- Issue Date
- 4-Mar-2021
- Publisher
- TAYLOR & FRANCIS LTD
- Keywords
- Mitochondrial genome; Trematomus loennbergii; Scaly rockcod; PacBio
- Citation
- MITOCHONDRIAL DNA PART B-RESOURCES, v.6, no.3, pp.1032 - 1033
- Indexed
- SCIE
SCOPUS
- Journal Title
- MITOCHONDRIAL DNA PART B-RESOURCES
- Volume
- 6
- Number
- 3
- Start Page
- 1032
- End Page
- 1033
- ISSN
- 2380-2359
- Abstract
- The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loennbergii was close to Pagothenia borchgrevinki in Nototheniidae. This study would provide a fundamental data for molecular evolution of T. loennbergii.
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Collections - Graduate School > Department of Biotechnology > 1. Journal Articles
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Related Researcher
- Chi, Young Min
- College of Life Sciences and Biotechnology (Division of Biotechnology)