Detailed Information

Cited 2 time in webofscience Cited 0 time in scopus
Metadata Downloads

Evaluating Genetic Diversity of Agaricus bisporus Accessions through Phylogenetic Analysis Using Single-Nucleotide Polymorphism (SNP) Markers

Authors
Oh, Youn-LeeChoi, In-GeolKong, Won-SikJang, Kab-YeulOh, Min JiIm, Ji-Hoon
Issue Date
2-1월-2021
Publisher
TAYLOR & FRANCIS LTD
Keywords
Principal coordinate analysis; genetic diversity; wild germplasm; button mushroom
Citation
MYCOBIOLOGY, v.49, no.1, pp.61 - 68
Indexed
SCIE
SCOPUS
KCI
Journal Title
MYCOBIOLOGY
Volume
49
Number
1
Start Page
61
End Page
68
URI
https://scholar.korea.ac.kr/handle/2021.sw.korea/50157
DOI
10.1080/12298093.2020.1850172
ISSN
1229-8093
Abstract
Agaricus bisporus, commonly known as the button mushroom, is widely cultivated throughout the world. To breed new strains with more desirable traits and improved adaptability, diverse germplasm, including wild accessions, is a valuable genetic resource. To better understand the genetic diversity available in A. bisporus and identify previously unknown diversity within accessions, a phylogenetic analysis of 360 Agaricus spp. accessions using single-nucleotide polymorphism genotyping was performed. Genetic relationships were compared using principal coordinate analysis (PCoA) among accessions with known origins and accessions with limited collection data. The accessions clustered into four groups based on the PCoA with regard to genetic relationships. A subset of 67 strains, which comprised a core collection where repetitive and uninformative accessions were not included, clustered into 7 groups following analysis. Two of the 170 accessions with limited collection data were identified as wild germplasm. The core collection allowed for the accurate analysis of A. bisporus genetic relationships, and accessions with an unknown pedigree were effectively grouped, allowing for origin identification, by PCoA analysis in this study.
Files in This Item
There are no files associated with this item.
Appears in
Collections
Graduate School > Department of Biotechnology > 1. Journal Articles

qrcode

Items in ScholarWorks are protected by copyright, with all rights reserved, unless otherwise indicated.

Altmetrics

Total Views & Downloads

BROWSE