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CT Male Pelvic Organ Segmentation via Hybrid Loss Network With Incomplete Annotation

Authors
Wang, ShuaiNie, DongQu, LiangqiongShao, YeqinLian, JunWang, QianShen, Dinggang
Issue Date
Jun-2020
Publisher
IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
Keywords
Image segmentation; male pelvic organ; deep learning; incomplete annotation; CT
Citation
IEEE TRANSACTIONS ON MEDICAL IMAGING, v.39, no.6, pp.2151 - 2162
Indexed
SCIE
SCOPUS
Journal Title
IEEE TRANSACTIONS ON MEDICAL IMAGING
Volume
39
Number
6
Start Page
2151
End Page
2162
URI
https://scholar.korea.ac.kr/handle/2021.sw.korea/55568
DOI
10.1109/TMI.2020.2966389
ISSN
0278-0062
Abstract
Sufficient data with complete annotation is essential for training deep models to perform automatic and accurate segmentation of CT male pelvic organs, especially when such data is with great challenges such as low contrast and large shape variation. However, manual annotation is expensive in terms of both finance and human effort, which usually results in insufficient completely annotated data in real applications. To this end, we propose a novel deep framework to segment male pelvic organs in CT images with incomplete annotation delineated in a very user-friendly manner. Specifically, we design a hybrid loss network derived from both voxel classification and boundary regression, to jointly improve the organ segmentation performance in an iterative way. Moreover, we introduce a label completion strategy to complete the labels of the rich unannotated voxels and then embed them into the training data to enhance the model capability. To reduce the computation complexity and improve segmentation performance, we locate the pelvic region based on salient bone structures to focus on the candidate segmentation organs. Experimental results on a large planning CT pelvic organ dataset show that our proposed method with incomplete annotation achieves comparable segmentation performance to the state-of-the-art methods with complete annotation. Moreover, our proposed method requires much less effort of manual contouring from medical professionals such that an institutional specific model can be more easily established.
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