Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation
- Authors
- Min, Byoungnam; Park, Hongjae; Jang, Yeongseon; Kim, Jae-Jin; Kim, Kyoung Heon; Pangilinan, Jasmyn; Lipzen, Anna; Riley, Robert; Grigoriev, Igor V.; Spatafora, Joseph W.; Choi, In-Geol
- Issue Date
- 10-10월-2015
- Publisher
- ELSEVIER
- Keywords
- Schizopora paradoxa KUC8140; White rot; Wood decaying fungus; Mycoremediation
- Citation
- JOURNAL OF BIOTECHNOLOGY, v.211, pp.42 - 43
- Indexed
- SCIE
SCOPUS
- Journal Title
- JOURNAL OF BIOTECHNOLOGY
- Volume
- 211
- Start Page
- 42
- End Page
- 43
- URI
- https://scholar.korea.ac.kr/handle/2021.sw.korea/92203
- DOI
- 10.1016/j.jbiotec.2015.06.426
- ISSN
- 0168-1656
- Abstract
- Schizopora paradoxa KUC8140 is a white rot wood degrader commonly found in Korea. Tolerance to heavy metals and polycyclic aromatic hydrocarbons and dye decolorization activity make this strain a potential candidate for mycoremediation. We report the genome sequence of S. paradoxa KUC8140 containing 44.4 Mbp. Based on ab initio gene prediction, homology search and RNA-seq, total 17,098 gene models were annotated. We identified 17 lignin-modifying peroxidases and other 377 carbohydrateactive enzymes for modeling lignocellulose deconstruction and mycoremediation. (C) 2015 Elsevier B.V. All rights reserved.
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- Appears in
Collections - College of Life Sciences and Biotechnology > Division of Environmental Science and Ecological Engineering > 1. Journal Articles
- Graduate School > Department of Biotechnology > 1. Journal Articles
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