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Crystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae

Authors
Lee, Ji-YoungPark, Si HoonJeong, Byung-CheonSong, Hyun Kyu
Issue Date
9월-2014
Publisher
INT UNION CRYSTALLOGRAPHY
Keywords
mRNA surveillance; nonstop decay; RNA degradation; Saccharomyces cerevisiae; Ski7
Citation
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, v.70, pp.1252 - 1255
Indexed
SCOPUS
Journal Title
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS
Volume
70
Start Page
1252
End Page
1255
URI
https://scholar.korea.ac.kr/handle/2021.sw.korea/97561
DOI
10.1107/S2053230X14016872
ISSN
2053-230X
Abstract
Ski7 (superkiller protein 7) plays a critical role in the mRNA surveillance pathway. The C-terminal fragment of Ski7 (residues 520-747) from Saccharomyces cerevisiae was heterologously expressed in Escherichia coli and purified to homogeneity. It was successfully crystallized and preliminary X-ray data were collected to 2.0 angstrom resolution using synchrotron radiation. The crystal belonged to a trigonal space group, either P3(1)21 or P3(2)21, with unit-cell parameters a = b = 73.5, c = 83.6 angstrom. The asymmetric unit contains one molecule of the C-terminal fragment of Ski7 with a corresponding crystal volume per protein mass (V-M) of 2.61 angstrom(3) Da(-1) and a solvent content of 52.8% by volume. The merging R factor is 6.6%. Structure determination by MAD phasing is under way.
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